Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.96□□□□□ -0.01
Trim60Q8VI40 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.96□□□□□ -0.01
Trim60Q8VI40 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.96□□□□□ -0.01
Trim60Q8VI40 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Gm5864-201ENSMUST00000202263 970 ntBASIC14.96□□□□□ -0.01
Trim60Q8VI40 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Gm7461-201ENSMUST00000058918 827 ntBASIC14.96□□□□□ -0.01
Trim60Q8VI40 Gm15590-201ENSMUST00000078419 552 ntBASIC14.96□□□□□ -0.01
Trim60Q8VI40 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim60Q8VI40 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.96□□□□□ -0.02
Trim60Q8VI40 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim60Q8VI40 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim60Q8VI40 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.02
Trim60Q8VI40 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.96□□□□□ -0.02
Trim60Q8VI40 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.95□□□□□ -0.02
Trim60Q8VI40 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Gm13884-201ENSMUST00000118103 829 ntBASIC14.95□□□□□ -0.02
Trim60Q8VI40 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.95□□□□□ -0.02
Trim60Q8VI40 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.95□□□□□ -0.02
Trim60Q8VI40 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim60Q8VI40 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Mir5126-201ENSMUST00000175513 77 ntBASIC14.94□□□□□ -0.02
Trim60Q8VI40 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim60Q8VI40 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim60Q8VI40 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms