Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh18Q8VHR0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh18Q8VHR0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh18Q8VHR0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh18Q8VHR0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh18Q8VHR0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh18Q8VHR0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh18Q8VHR0 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.96□□□□□ -0.18
Pcdh18Q8VHR0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh18Q8VHR0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh18Q8VHR0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh18Q8VHR0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms