Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4aQ8VEJ9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4aQ8VEJ9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4aQ8VEJ9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Vps4aQ8VEJ9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4aQ8VEJ9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4aQ8VEJ9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Gm12008-201ENSMUST00000117791 755 ntBASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Gm20949-201ENSMUST00000206478 952 ntBASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vps4aQ8VEJ9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Gm23547-201ENSMUST00000158210 271 ntBASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Gm5312-201ENSMUST00000203728 547 ntBASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4aQ8VEJ9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4aQ8VEJ9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms