Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retreg1dQ8VE91 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Gm25287-201ENSMUST00000103846 110 ntBASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Gm22918-201ENSMUST00000103855 110 ntBASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Gm5779-201ENSMUST00000218467 910 ntBASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retreg1dQ8VE91 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Gm2810-201ENSMUST00000118681 990 ntBASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retreg1dQ8VE91 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retreg1dQ8VE91 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retreg1dQ8VE91 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Retreg1dQ8VE91 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms