Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Gm7488-201ENSMUST00000117148 684 ntBASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Gm29667-201ENSMUST00000190817 490 ntBASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Efs-202ENSMUST00000227037 2540 ntBASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Gm5745-201ENSMUST00000183748 313 ntBASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.03■□□□□ 0.16
Ddx39aQ8VDW0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Gm15321-201ENSMUST00000121290 288 ntBASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Gm3436-201ENSMUST00000179930 840 ntBASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Gm5186-201ENSMUST00000218781 920 ntBASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Gm6218-201ENSMUST00000219812 628 ntBASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Ddx39aQ8VDW0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx39aQ8VDW0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx39aQ8VDW0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx39aQ8VDW0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx39aQ8VDW0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ddx39aQ8VDW0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx39aQ8VDW0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx39aQ8VDW0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ddx39aQ8VDW0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Gm11424-201ENSMUST00000121929 829 ntBASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx39aQ8VDW0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms