Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Mir5130-201ENSMUST00000175160 84 ntBASIC14.13□□□□□ -0.15
Q8VDP2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.13□□□□□ -0.15
Q8VDP2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Q8VDP2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Q8VDP2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q8VDP2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Q8VDP2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Q8VDP2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.12□□□□□ -0.15
Q8VDP2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.12□□□□□ -0.15
Q8VDP2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.12□□□□□ -0.15
Q8VDP2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Q8VDP2 Gm6659-201ENSMUST00000174752 547 ntBASIC14.12□□□□□ -0.15
Q8VDP2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.12□□□□□ -0.15
Q8VDP2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.12□□□□□ -0.15
Q8VDP2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.12□□□□□ -0.15
Q8VDP2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.12□□□□□ -0.15
Q8VDP2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.12□□□□□ -0.15
Q8VDP2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Q8VDP2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Q8VDP2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Q8VDP2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q8VDP2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Q8VDP2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.11□□□□□ -0.15
Q8VDP2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Q8VDP2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Q8VDP2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.11□□□□□ -0.15
Q8VDP2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.11□□□□□ -0.15
Q8VDP2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.11□□□□□ -0.15
Q8VDP2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.11□□□□□ -0.15
Q8VDP2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Q8VDP2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.11□□□□□ -0.15
Q8VDP2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q8VDP2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.1□□□□□ -0.15
Q8VDP2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Q8VDP2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q8VDP2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q8VDP2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Q8VDP2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q8VDP2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Q8VDP2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Q8VDP2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q8VDP2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q8VDP2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.1□□□□□ -0.15
Q8VDP2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q8VDP2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Q8VDP2 Gm18101-201ENSMUST00000215769 548 ntBASIC14.1□□□□□ -0.15
Q8VDP2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Q8VDP2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Q8VDP2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Q8VDP2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms