Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Gm7284-201ENSMUST00000131667 944 ntBASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Gm5682-201ENSMUST00000173402 505 ntBASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup35Q8R4R6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Gm13418-201ENSMUST00000119097 944 ntBASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Gm13836-201ENSMUST00000121159 501 ntBASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.78□□□□□ -0.52
Nup35Q8R4R6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms