Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cuedc1Q8R3V6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cuedc1Q8R3V6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cuedc1Q8R3V6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cuedc1Q8R3V6 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Cuedc1Q8R3V6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cuedc1Q8R3V6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cuedc1Q8R3V6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cuedc1Q8R3V6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cuedc1Q8R3V6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cuedc1Q8R3V6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cuedc1Q8R3V6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cuedc1Q8R3V6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Gm7488-201ENSMUST00000117148 684 ntBASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Gm7730-201ENSMUST00000212486 454 ntBASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Gm2423-201ENSMUST00000074863 733 ntBASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Cuedc1Q8R3V6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms