Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slf1Q8R3P9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slf1Q8R3P9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Grk6-207ENSMUST00000225925 2769 ntBASIC14.62□□□□□ -0.07
Slf1Q8R3P9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Gm9103-201ENSMUST00000119371 405 ntBASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slf1Q8R3P9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms