Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Gm2756-201ENSMUST00000195851 400 ntBASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Gm43767-201ENSMUST00000198933 381 ntBASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lrrc42Q8R2U7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Lrrc42Q8R2U7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrc42Q8R2U7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrc42Q8R2U7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrc42Q8R2U7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.08■□□□□ 0.01
Lrrc42Q8R2U7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lrrc42Q8R2U7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Gm16198-201ENSMUST00000118766 670 ntBASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Gm10154-201ENSMUST00000084445 354 ntBASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lrrc42Q8R2U7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Gm15427-201ENSMUST00000117288 531 ntBASIC15.07■□□□□ 0
Lrrc42Q8R2U7 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Gm25911-201ENSMUST00000157621 56 ntBASIC15.07■□□□□ 0
Lrrc42Q8R2U7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lrrc42Q8R2U7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.06■□□□□ 0
Lrrc42Q8R2U7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms