Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3a1Q8K4Z5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Gm24158-201ENSMUST00000175263 71 ntBASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Gm9824-201ENSMUST00000178707 561 ntBASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.69■□□□□ 0.42
Sf3a1Q8K4Z5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Mir449b-201ENSMUST00000104833 80 ntBASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Gm18049-201ENSMUST00000208909 581 ntBASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sf3a1Q8K4Z5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Gm10253-201ENSMUST00000194270 940 ntBASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sf3a1Q8K4Z5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Gm29541-201ENSMUST00000191351 678 ntBASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms