Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.65□□□□□ -0.22
Clrn1Q8K445 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clrn1Q8K445 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Clrn1Q8K445 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.64□□□□□ -0.23
Clrn1Q8K445 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.64□□□□□ -0.23
Clrn1Q8K445 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clrn1Q8K445 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.63□□□□□ -0.23
Clrn1Q8K445 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.63□□□□□ -0.23
Clrn1Q8K445 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Gm23547-201ENSMUST00000158210 271 ntBASIC13.63□□□□□ -0.23
Clrn1Q8K445 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Gm18737-201ENSMUST00000173594 937 ntBASIC13.63□□□□□ -0.23
Clrn1Q8K445 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn1Q8K445 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms