Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Gm13884-201ENSMUST00000118103 829 ntBASIC9.1□□□□□ -0.95
Cystm1Q8K353 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Gm18733-201ENSMUST00000173950 856 ntBASIC9.1□□□□□ -0.95
Cystm1Q8K353 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Gm36967-201ENSMUST00000193814 266 ntBASIC9.1□□□□□ -0.95
Cystm1Q8K353 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Gm43514-201ENSMUST00000198852 424 ntBASIC9.1□□□□□ -0.95
Cystm1Q8K353 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.1□□□□□ -0.95
Cystm1Q8K353 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cystm1Q8K353 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.09□□□□□ -0.95
Cystm1Q8K353 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Gm7935-201ENSMUST00000100555 1278 ntBASIC9.09□□□□□ -0.95
Cystm1Q8K353 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Gm5864-201ENSMUST00000202263 970 ntBASIC9.09□□□□□ -0.95
Cystm1Q8K353 Gm6443-201ENSMUST00000203599 874 ntBASIC9.09□□□□□ -0.95
Cystm1Q8K353 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC9.09□□□□□ -0.95
Cystm1Q8K353 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cystm1Q8K353 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.96
Cystm1Q8K353 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cystm1Q8K353 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms