Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Gm18889-201ENSMUST00000174284 929 ntBASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Gm27920-201ENSMUST00000183953 96 ntBASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfwd3Q8CIK8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Gm9726-201ENSMUST00000180321 678 ntBASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Gm2451-201ENSMUST00000199447 999 ntBASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Gm10290-201ENSMUST00000200451 999 ntBASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfwd3Q8CIK8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms