Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab11fip3Q8CHD8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab11fip3Q8CHD8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.64■□□□□ 0.58
Rab11fip3Q8CHD8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rab11fip3Q8CHD8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rab11fip3Q8CHD8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rab11fip3Q8CHD8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Gm9522-201ENSMUST00000182394 926 ntBASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Gm28631-201ENSMUST00000190740 334 ntBASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab11fip3Q8CHD8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Gm22189-201ENSMUST00000103822 86 ntBASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Rab11fip3Q8CHD8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms