Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.3□□□□□ -0.12
Lrif1Q8CDD9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Gm13036-201ENSMUST00000117799 748 ntBASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Gm15358-201ENSMUST00000119249 520 ntBASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Gm8000-201ENSMUST00000188378 592 ntBASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Gm5364-201ENSMUST00000216789 889 ntBASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrif1Q8CDD9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.28□□□□□ -0.12
Lrif1Q8CDD9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms