Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.2■□□□□ 0.02
Q8CD60 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.2■□□□□ 0.02
Q8CD60 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Q8CD60 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Q8CD60 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Q8CD60 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
Q8CD60 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Q8CD60 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Gm25287-201ENSMUST00000103846 110 ntBASIC15.19■□□□□ 0.02
Q8CD60 Gm22918-201ENSMUST00000103855 110 ntBASIC15.19■□□□□ 0.02
Q8CD60 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Q8CD60 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.19■□□□□ 0.02
Q8CD60 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.19■□□□□ 0.02
Q8CD60 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.19■□□□□ 0.02
Q8CD60 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.19■□□□□ 0.02
Q8CD60 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.19■□□□□ 0.02
Q8CD60 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Q8CD60 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.19■□□□□ 0.02
Q8CD60 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Q8CD60 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.18■□□□□ 0.02
Q8CD60 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.18■□□□□ 0.02
Q8CD60 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Q8CD60 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.18■□□□□ 0.02
Q8CD60 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Q8CD60 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Q8CD60 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Q8CD60 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Gm22065-201ENSMUST00000103753 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm22066-201ENSMUST00000103761 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm24932-201ENSMUST00000103763 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm24115-201ENSMUST00000103799 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm22190-201ENSMUST00000103827 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm22191-201ENSMUST00000103831 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm24721-201ENSMUST00000103849 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm28018-201ENSMUST00000103869 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm26399-201ENSMUST00000103937 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Gm14701-201ENSMUST00000117156 348 ntBASIC15.18■□□□□ 0.02
Q8CD60 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Q8CD60 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Q8CD60 Gm25349-201ENSMUST00000177728 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm23616-201ENSMUST00000177797 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm25871-201ENSMUST00000177816 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm24752-201ENSMUST00000178240 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm24496-201ENSMUST00000178287 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm25649-201ENSMUST00000178476 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm25548-201ENSMUST00000178681 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm23147-201ENSMUST00000178841 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm26095-201ENSMUST00000179270 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm22171-201ENSMUST00000179283 110 ntBASIC15.18■□□□□ 0.02
Q8CD60 Gm23936-201ENSMUST00000179354 110 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms