Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.02■□□□□ 0.32
E4f1Q8CCE9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC17.02■□□□□ 0.31
E4f1Q8CCE9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.02■□□□□ 0.31
E4f1Q8CCE9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
E4f1Q8CCE9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.02■□□□□ 0.31
E4f1Q8CCE9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
E4f1Q8CCE9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
E4f1Q8CCE9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
E4f1Q8CCE9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
E4f1Q8CCE9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Gm5866-201ENSMUST00000177881 973 ntBASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
E4f1Q8CCE9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
E4f1Q8CCE9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17■□□□□ 0.31
E4f1Q8CCE9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Gm42934-201ENSMUST00000196920 1345 ntBASIC17■□□□□ 0.31
E4f1Q8CCE9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
E4f1Q8CCE9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17■□□□□ 0.31
E4f1Q8CCE9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Gm8410-201ENSMUST00000117225 605 ntBASIC17■□□□□ 0.31
E4f1Q8CCE9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17■□□□□ 0.31
E4f1Q8CCE9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17■□□□□ 0.31
E4f1Q8CCE9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
E4f1Q8CCE9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Mir8102-201ENSMUST00000184148 139 ntBASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
E4f1Q8CCE9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms