Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Gm9182-201ENSMUST00000217829 639 ntBASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtp1Q8C8C1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rtp1Q8C8C1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.39■□□□□ 0.22
Rtp1Q8C8C1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtp1Q8C8C1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Gm8652-201ENSMUST00000181363 964 ntBASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Gm2495-201ENSMUST00000191160 466 ntBASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Gm7561-201ENSMUST00000211203 886 ntBASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Gm17795-201ENSMUST00000214505 757 ntBASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtp1Q8C8C1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Gm8749-201ENSMUST00000117737 331 ntBASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Gm6091-201ENSMUST00000098307 165 ntBASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.37■□□□□ 0.21
Rtp1Q8C8C1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms