Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Gm40466-201ENSMUST00000212174 422 ntBASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap54Q8C6S9 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Gm15460-201ENSMUST00000118147 391 ntBASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap54Q8C6S9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Gm24526-201ENSMUST00000082921 158 ntBASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap54Q8C6S9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Gm8749-201ENSMUST00000117737 331 ntBASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Gm3961-201ENSMUST00000204425 994 ntBASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap54Q8C6S9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms