Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Gm27892-201ENSMUST00000185017 106 ntBASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Gm45098-201ENSMUST00000207179 657 ntBASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Gm5035-201ENSMUST00000215581 927 ntBASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ptcd1Q8C2E4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.77■□□□□ 0.43
Ptcd1Q8C2E4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Efs-202ENSMUST00000227037 2540 ntBASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Gm4984-201ENSMUST00000115987 360 ntBASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ptcd1Q8C2E4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Gm45453-201ENSMUST00000211758 853 ntBASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Gm19220-201ENSMUST00000222682 803 ntBASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ptcd1Q8C2E4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.74■□□□□ 0.43
Ptcd1Q8C2E4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms