Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tsen54Q8C2A2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Gm7506-201ENSMUST00000207758 815 ntBASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tsen54Q8C2A2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Gm28659-201ENSMUST00000188013 759 ntBASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tsen54Q8C2A2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tsen54Q8C2A2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms