Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps9d1Q8C190 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps9d1Q8C190 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Gm18246-201ENSMUST00000221023 728 ntBASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Gm15590-201ENSMUST00000078419 552 ntBASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps9d1Q8C190 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms