Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.07■□□□□ 0
Sh3rf3Q8C120 Gm37230-201ENSMUST00000194491 818 ntBASIC15.07■□□□□ 0
Sh3rf3Q8C120 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.07■□□□□ 0
Sh3rf3Q8C120 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf3Q8C120 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.06■□□□□ 0
Sh3rf3Q8C120 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.06■□□□□ 0
Sh3rf3Q8C120 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Gm45098-201ENSMUST00000207179 657 ntBASIC15.06■□□□□ 0
Sh3rf3Q8C120 Gm45612-201ENSMUST00000211320 160 ntBASIC15.06■□□□□ 0
Sh3rf3Q8C120 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.06■□□□□ 0
Sh3rf3Q8C120 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf3Q8C120 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf3Q8C120 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.05■□□□□ 0
Sh3rf3Q8C120 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf3Q8C120 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf3Q8C120 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.05■□□□□ 0
Sh3rf3Q8C120 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf3Q8C120 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Sh3rf3Q8C120 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf3Q8C120 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Sh3rf3Q8C120 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf3Q8C120 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf3Q8C120 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf3Q8C120 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf3Q8C120 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.05■□□□□ -0
Sh3rf3Q8C120 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.05■□□□□ -0
Sh3rf3Q8C120 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms