Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.92□□□□□ -0.5
Smco3Q8BQM7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Gm4459-201ENSMUST00000118750 468 ntBASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Gm15794-201ENSMUST00000120182 631 ntBASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Gm10499-201ENSMUST00000174094 934 ntBASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Mir3081-201ENSMUST00000175305 84 ntBASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.91□□□□□ -0.5
Smco3Q8BQM7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smco3Q8BQM7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.9□□□□□ -0.5
Smco3Q8BQM7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Gm12497-201ENSMUST00000138778 237 ntBASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smco3Q8BQM7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Smco3Q8BQM7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smco3Q8BQM7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Smco3Q8BQM7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Gm15165-201ENSMUST00000118140 502 ntBASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smco3Q8BQM7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms