Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Gm27702-201ENSMUST00000184512 56 ntBASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh20Q8BIZ0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh20Q8BIZ0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms