Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.96■□□□□ 0.31
Samm50Q8BGH2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Samm50Q8BGH2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Samm50Q8BGH2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Samm50Q8BGH2 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.96■□□□□ 0.3
Samm50Q8BGH2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.96■□□□□ 0.3
Samm50Q8BGH2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Samm50Q8BGH2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Samm50Q8BGH2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Samm50Q8BGH2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Samm50Q8BGH2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.93■□□□□ 0.3
Samm50Q8BGH2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.93■□□□□ 0.3
Samm50Q8BGH2 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.93■□□□□ 0.3
Samm50Q8BGH2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms