Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.26□□□□□ -0.13
Ubp1Q811S7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Gm14701-201ENSMUST00000117156 348 ntBASIC14.26□□□□□ -0.13
Ubp1Q811S7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.26□□□□□ -0.13
Ubp1Q811S7 Gm18737-201ENSMUST00000173594 937 ntBASIC14.26□□□□□ -0.13
Ubp1Q811S7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.26□□□□□ -0.13
Ubp1Q811S7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ubp1Q811S7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.25□□□□□ -0.13
Ubp1Q811S7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.25□□□□□ -0.13
Ubp1Q811S7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ubp1Q811S7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ubp1Q811S7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.24□□□□□ -0.13
Ubp1Q811S7 Gm9182-201ENSMUST00000217829 639 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms