Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk3bQ80YF6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.22□□□□□ -0.45
Upk3bQ80YF6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Upk3bQ80YF6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms