Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.07■□□□□ 0
Srrm3Q80WV7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Srrm3Q80WV7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.07■□□□□ 0
Srrm3Q80WV7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Srrm3Q80WV7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.07■□□□□ 0
Srrm3Q80WV7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.07■□□□□ 0
Srrm3Q80WV7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.06■□□□□ 0
Srrm3Q80WV7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Srrm3Q80WV7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Gm13418-201ENSMUST00000119097 944 ntBASIC15.06■□□□□ 0
Srrm3Q80WV7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.06■□□□□ 0
Srrm3Q80WV7 Gm18041-201ENSMUST00000218210 618 ntBASIC15.06■□□□□ 0
Srrm3Q80WV7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.06■□□□□ 0
Srrm3Q80WV7 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.06■□□□□ 0
Srrm3Q80WV7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.06■□□□□ 0
Srrm3Q80WV7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Srrm3Q80WV7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm3Q80WV7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.05■□□□□ 0
Srrm3Q80WV7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
Srrm3Q80WV7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Srrm3Q80WV7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.05■□□□□ 0
Srrm3Q80WV7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Srrm3Q80WV7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Srrm3Q80WV7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.05■□□□□ 0
Srrm3Q80WV7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.05■□□□□ -0
Srrm3Q80WV7 Gm15358-201ENSMUST00000119249 520 ntBASIC15.05■□□□□ -0
Srrm3Q80WV7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.05■□□□□ -0
Srrm3Q80WV7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Srrm3Q80WV7 Mir6956-201ENSMUST00000183598 62 ntBASIC15.05■□□□□ -0
Srrm3Q80WV7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Srrm3Q80WV7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm3Q80WV7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Srrm3Q80WV7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.04■□□□□ -0
Srrm3Q80WV7 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.04■□□□□ -0
Srrm3Q80WV7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Srrm3Q80WV7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms