Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Gm12151-201ENSMUST00000121374 290 ntBASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Gm27321-201ENSMUST00000185021 205 ntBASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp3Q7TNH6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Gm44344-201ENSMUST00000200287 129 ntBASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp3Q7TNH6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nphp3Q7TNH6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nphp3Q7TNH6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nphp3Q7TNH6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nphp3Q7TNH6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nphp3Q7TNH6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nphp3Q7TNH6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Nphp3Q7TNH6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nphp3Q7TNH6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nphp3Q7TNH6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nphp3Q7TNH6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 BC001981-202ENSMUST00000191393 1545 ntBASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nphp3Q7TNH6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms