Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.79□□□□□ -0.52
Vma21Q78T54 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Gm13464-201ENSMUST00000119418 935 ntBASIC11.79□□□□□ -0.52
Vma21Q78T54 Gm7862-201ENSMUST00000121461 292 ntBASIC11.79□□□□□ -0.52
Vma21Q78T54 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.79□□□□□ -0.52
Vma21Q78T54 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.78□□□□□ -0.52
Vma21Q78T54 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Vma21Q78T54 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.78□□□□□ -0.52
Vma21Q78T54 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.78□□□□□ -0.52
Vma21Q78T54 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.78□□□□□ -0.52
Vma21Q78T54 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.78□□□□□ -0.52
Vma21Q78T54 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.78□□□□□ -0.52
Vma21Q78T54 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vma21Q78T54 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vma21Q78T54 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vma21Q78T54 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vma21Q78T54 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vma21Q78T54 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vma21Q78T54 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vma21Q78T54 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vma21Q78T54 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vma21Q78T54 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vma21Q78T54 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Vma21Q78T54 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.77□□□□□ -0.53
Vma21Q78T54 Gm8749-201ENSMUST00000117737 331 ntBASIC11.77□□□□□ -0.53
Vma21Q78T54 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vma21Q78T54 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.77□□□□□ -0.53
Vma21Q78T54 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Gm10060-201ENSMUST00000212002 111 ntBASIC11.77□□□□□ -0.53
Vma21Q78T54 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Vma21Q78T54 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vma21Q78T54 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms