Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Snora78-201ENSMUST00000158630 128 ntBASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Gm45784-201ENSMUST00000188360 142 ntBASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Gm19078-201ENSMUST00000206311 727 ntBASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx55Q6ZPL9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx55Q6ZPL9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.33■□□□□ 0.21
Ddx55Q6ZPL9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx55Q6ZPL9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx55Q6ZPL9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.33■□□□□ 0.21
Ddx55Q6ZPL9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Gm37714-201ENSMUST00000194742 342 ntBASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Gm7287-201ENSMUST00000205267 602 ntBASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 BC037039-201ENSMUST00000192003 2205 ntBASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ddx55Q6ZPL9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Gm11814-201ENSMUST00000119515 929 ntBASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Gm14660-201ENSMUST00000119809 575 ntBASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Gm8062-201ENSMUST00000139696 444 ntBASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Gm15429-201ENSMUST00000151268 798 ntBASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Gm43094-201ENSMUST00000196549 921 ntBASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Gm7561-201ENSMUST00000211203 886 ntBASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx55Q6ZPL9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ddx55Q6ZPL9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms