Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Col11a2Q64739 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.15■□□□□ 0.34
Col11a2Q64739 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col11a2Q64739 Gm37466-201ENSMUST00000195692 652 ntBASIC17.15■□□□□ 0.34
Col11a2Q64739 Gm37008-201ENSMUST00000195712 319 ntBASIC17.15■□□□□ 0.34
Col11a2Q64739 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.15■□□□□ 0.34
Col11a2Q64739 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.15■□□□□ 0.34
Col11a2Q64739 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col11a2Q64739 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col11a2Q64739 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.15■□□□□ 0.34
Col11a2Q64739 Carlr-201ENSMUST00000181515 2574 ntBASIC17.15■□□□□ 0.34
Col11a2Q64739 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col11a2Q64739 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Col11a2Q64739 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col11a2Q64739 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col11a2Q64739 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Col11a2Q64739 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Col11a2Q64739 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.14■□□□□ 0.33
Col11a2Q64739 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col11a2Q64739 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.13■□□□□ 0.33
Col11a2Q64739 Gm29741-201ENSMUST00000192667 421 ntBASIC17.13■□□□□ 0.33
Col11a2Q64739 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col11a2Q64739 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.13■□□□□ 0.33
Col11a2Q64739 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col11a2Q64739 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.13■□□□□ 0.33
Col11a2Q64739 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.13■□□□□ 0.33
Col11a2Q64739 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.13■□□□□ 0.33
Col11a2Q64739 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17.13■□□□□ 0.33
Col11a2Q64739 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.13■□□□□ 0.33
Col11a2Q64739 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col11a2Q64739 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col11a2Q64739 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Col11a2Q64739 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.12■□□□□ 0.33
Col11a2Q64739 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col11a2Q64739 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms