Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six3Q62233 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six3Q62233 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six3Q62233 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six3Q62233 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six3Q62233 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six3Q62233 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six3Q62233 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six3Q62233 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six3Q62233 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six3Q62233 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Six3Q62233 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Six3Q62233 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Six3Q62233 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.13□□□□□ -0.15
Six3Q62233 Gm27741-201ENSMUST00000185060 237 ntBASIC14.13□□□□□ -0.15
Six3Q62233 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.13□□□□□ -0.15
Six3Q62233 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Six3Q62233 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Six3Q62233 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Six3Q62233 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six3Q62233 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Six3Q62233 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.12□□□□□ -0.15
Six3Q62233 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.12□□□□□ -0.15
Six3Q62233 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.12□□□□□ -0.15
Six3Q62233 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Six3Q62233 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.12□□□□□ -0.15
Six3Q62233 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.12□□□□□ -0.15
Six3Q62233 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.12□□□□□ -0.15
Six3Q62233 Gm15483-201ENSMUST00000120338 456 ntBASIC14.12□□□□□ -0.15
Six3Q62233 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Six3Q62233 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.12□□□□□ -0.15
Six3Q62233 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.12□□□□□ -0.15
Six3Q62233 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.12□□□□□ -0.15
Six3Q62233 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Six3Q62233 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.12□□□□□ -0.15
Six3Q62233 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.12□□□□□ -0.15
Six3Q62233 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.12□□□□□ -0.15
Six3Q62233 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Six3Q62233 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six3Q62233 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Six3Q62233 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Six3Q62233 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six3Q62233 Gm37230-201ENSMUST00000194491 818 ntBASIC14.11□□□□□ -0.15
Six3Q62233 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Six3Q62233 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms