Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.32□□□□□ -0.28
VcanQ62059 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.32□□□□□ -0.28
VcanQ62059 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.32□□□□□ -0.28
VcanQ62059 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.32□□□□□ -0.28
VcanQ62059 Gm29705-201ENSMUST00000212598 474 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.32□□□□□ -0.28
VcanQ62059 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.31□□□□□ -0.28
VcanQ62059 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Gm8285-201ENSMUST00000208293 759 ntBASIC13.31□□□□□ -0.28
VcanQ62059 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.31□□□□□ -0.28
VcanQ62059 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
VcanQ62059 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VcanQ62059 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
VcanQ62059 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.31□□□□□ -0.28
VcanQ62059 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.31□□□□□ -0.28
VcanQ62059 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.31□□□□□ -0.28
VcanQ62059 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.31□□□□□ -0.28
VcanQ62059 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VcanQ62059 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.31□□□□□ -0.28
VcanQ62059 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VcanQ62059 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.3□□□□□ -0.28
VcanQ62059 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
VcanQ62059 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.3□□□□□ -0.28
VcanQ62059 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VcanQ62059 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VcanQ62059 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VcanQ62059 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VcanQ62059 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VcanQ62059 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VcanQ62059 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Gm15240-201ENSMUST00000118156 720 ntBASIC13.3□□□□□ -0.28
VcanQ62059 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.3□□□□□ -0.28
VcanQ62059 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.3□□□□□ -0.28
VcanQ62059 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.3□□□□□ -0.28
VcanQ62059 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.3□□□□□ -0.28
VcanQ62059 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Gm27682-201ENSMUST00000183930 110 ntBASIC13.3□□□□□ -0.28
VcanQ62059 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Gm45098-201ENSMUST00000207179 657 ntBASIC13.3□□□□□ -0.28
VcanQ62059 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.3□□□□□ -0.28
VcanQ62059 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.3□□□□□ -0.28
VcanQ62059 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.3□□□□□ -0.28
VcanQ62059 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.3□□□□□ -0.28
VcanQ62059 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VcanQ62059 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.29□□□□□ -0.28
VcanQ62059 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VcanQ62059 Mir1943-201ENSMUST00000158276 73 ntBASIC13.29□□□□□ -0.28
VcanQ62059 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VcanQ62059 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.29□□□□□ -0.28
VcanQ62059 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.29□□□□□ -0.28
VcanQ62059 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.29□□□□□ -0.28
VcanQ62059 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VcanQ62059 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
VcanQ62059 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
VcanQ62059 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms