Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC19.09■□□□□ 0.65
Gli3Q61602 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC19.09■□□□□ 0.65
Gli3Q61602 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gli3Q61602 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC19.09■□□□□ 0.65
Gli3Q61602 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC19.09■□□□□ 0.65
Gli3Q61602 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gli3Q61602 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gli3Q61602 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gli3Q61602 AC159196.2-201ENSMUST00000224082 1622 ntBASIC19.09■□□□□ 0.65
Gli3Q61602 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gli3Q61602 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.09■□□□□ 0.65
Gli3Q61602 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gli3Q61602 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Gli3Q61602 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.08■□□□□ 0.65
Gli3Q61602 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Gli3Q61602 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Gli3Q61602 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
Gli3Q61602 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gli3Q61602 Gm11618-201ENSMUST00000117946 267 ntBASIC19.08■□□□□ 0.65
Gli3Q61602 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC19.08■□□□□ 0.65
Gli3Q61602 Gm4993-201ENSMUST00000118719 1174 ntBASIC19.08■□□□□ 0.65
Gli3Q61602 Gm11222-201ENSMUST00000119005 738 ntBASIC19.08■□□□□ 0.65
Gli3Q61602 Gm14277-201ENSMUST00000121195 360 ntBASIC19.08■□□□□ 0.65
Gli3Q61602 Gm13123-201ENSMUST00000122173 492 ntBASIC19.08■□□□□ 0.65
Gli3Q61602 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC19.08■□□□□ 0.65
Gli3Q61602 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC19.08■□□□□ 0.65
Gli3Q61602 Gm27438-201ENSMUST00000183480 110 ntBASIC19.08■□□□□ 0.65
Gli3Q61602 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gli3Q61602 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.08■□□□□ 0.64
Gli3Q61602 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.08■□□□□ 0.64
Gli3Q61602 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gli3Q61602 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gli3Q61602 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.07■□□□□ 0.64
Gli3Q61602 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Gli3Q61602 Gm14208-201ENSMUST00000119645 678 ntBASIC19.07■□□□□ 0.64
Gli3Q61602 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC19.07■□□□□ 0.64
Gli3Q61602 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC19.07■□□□□ 0.64
Gli3Q61602 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.07■□□□□ 0.64
Gli3Q61602 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Gli3Q61602 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC19.07■□□□□ 0.64
Gli3Q61602 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.07■□□□□ 0.64
Gli3Q61602 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gli3Q61602 Gm8566-201ENSMUST00000120174 465 ntBASIC19.06■□□□□ 0.64
Gli3Q61602 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Gli3Q61602 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC19.06■□□□□ 0.64
Gli3Q61602 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gli3Q61602 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gli3Q61602 Gm42550-201ENSMUST00000201553 960 ntBASIC19.06■□□□□ 0.64
Gli3Q61602 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC19.06■□□□□ 0.64
Gli3Q61602 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC19.06■□□□□ 0.64
Gli3Q61602 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gli3Q61602 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC19.06■□□□□ 0.64
Gli3Q61602 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gli3Q61602 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gli3Q61602 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gli3Q61602 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC19.06■□□□□ 0.64
Gli3Q61602 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gli3Q61602 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gli3Q61602 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC19.06■□□□□ 0.64
Gli3Q61602 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Gli3Q61602 Gm6407-201ENSMUST00000176468 549 ntBASIC19.06■□□□□ 0.64
Gli3Q61602 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gli3Q61602 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gli3Q61602 Morn2-202ENSMUST00000227729 656 ntBASIC19.06■□□□□ 0.64
Gli3Q61602 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gli3Q61602 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gli3Q61602 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC19.06■□□□□ 0.64
Gli3Q61602 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Gli3Q61602 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Gli3Q61602 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Gli3Q61602 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC19.05■□□□□ 0.64
Gli3Q61602 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Gli3Q61602 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC19.05■□□□□ 0.64
Gli3Q61602 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Gli3Q61602 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC19.05■□□□□ 0.64
Gli3Q61602 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Gli3Q61602 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Gli3Q61602 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms