Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14□□□□□ -0.17
Col12a1Q60847 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col12a1Q60847 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14□□□□□ -0.17
Col12a1Q60847 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Col12a1Q60847 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col12a1Q60847 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col12a1Q60847 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14□□□□□ -0.17
Col12a1Q60847 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14□□□□□ -0.17
Col12a1Q60847 Mir5120-201ENSMUST00000175020 78 ntBASIC14□□□□□ -0.17
Col12a1Q60847 Gm4971-201ENSMUST00000205991 1108 ntBASIC14□□□□□ -0.17
Col12a1Q60847 Gm44608-201ENSMUST00000206827 855 ntBASIC14□□□□□ -0.17
Col12a1Q60847 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Col12a1Q60847 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Carlr-201ENSMUST00000181515 2574 ntBASIC14□□□□□ -0.17
Col12a1Q60847 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.99□□□□□ -0.17
Col12a1Q60847 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col12a1Q60847 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Gm2991-201ENSMUST00000173338 480 ntBASIC13.99□□□□□ -0.17
Col12a1Q60847 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.99□□□□□ -0.17
Col12a1Q60847 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.99□□□□□ -0.17
Col12a1Q60847 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.99□□□□□ -0.17
Col12a1Q60847 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Col12a1Q60847 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col12a1Q60847 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col12a1Q60847 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col12a1Q60847 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col12a1Q60847 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.98□□□□□ -0.17
Col12a1Q60847 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.98□□□□□ -0.17
Col12a1Q60847 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.98□□□□□ -0.17
Col12a1Q60847 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.98□□□□□ -0.17
Col12a1Q60847 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col12a1Q60847 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col12a1Q60847 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col12a1Q60847 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col12a1Q60847 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col12a1Q60847 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col12a1Q60847 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.98□□□□□ -0.17
Col12a1Q60847 Gm6023-201ENSMUST00000118217 606 ntBASIC13.98□□□□□ -0.17
Col12a1Q60847 Gm12241-201ENSMUST00000118330 726 ntBASIC13.98□□□□□ -0.17
Col12a1Q60847 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col12a1Q60847 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.98□□□□□ -0.17
Col12a1Q60847 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.98□□□□□ -0.17
Col12a1Q60847 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col12a1Q60847 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col12a1Q60847 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.98□□□□□ -0.17
Col12a1Q60847 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.97□□□□□ -0.17
Col12a1Q60847 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.97□□□□□ -0.17
Col12a1Q60847 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.97□□□□□ -0.17
Col12a1Q60847 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.97□□□□□ -0.17
Col12a1Q60847 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col12a1Q60847 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.97□□□□□ -0.17
Col12a1Q60847 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.97□□□□□ -0.17
Col12a1Q60847 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.97□□□□□ -0.17
Col12a1Q60847 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col12a1Q60847 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col12a1Q60847 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col12a1Q60847 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col12a1Q60847 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col12a1Q60847 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms