Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NfkbibQ60778 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NfkbibQ60778 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.32■□□□□ 0.36
NfkbibQ60778 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.32■□□□□ 0.36
NfkbibQ60778 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.32■□□□□ 0.36
NfkbibQ60778 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.32■□□□□ 0.36
NfkbibQ60778 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.32■□□□□ 0.36
NfkbibQ60778 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.32■□□□□ 0.36
NfkbibQ60778 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.31■□□□□ 0.36
NfkbibQ60778 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NfkbibQ60778 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.31■□□□□ 0.36
NfkbibQ60778 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.31■□□□□ 0.36
NfkbibQ60778 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.31■□□□□ 0.36
NfkbibQ60778 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NfkbibQ60778 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NfkbibQ60778 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NfkbibQ60778 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.31■□□□□ 0.36
NfkbibQ60778 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NfkbibQ60778 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.31■□□□□ 0.36
NfkbibQ60778 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Gm33320-201ENSMUST00000192232 530 ntBASIC17.3■□□□□ 0.36
NfkbibQ60778 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NfkbibQ60778 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NfkbibQ60778 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.29■□□□□ 0.36
NfkbibQ60778 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.29■□□□□ 0.36
NfkbibQ60778 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.29■□□□□ 0.36
NfkbibQ60778 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.29■□□□□ 0.36
NfkbibQ60778 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.29■□□□□ 0.36
NfkbibQ60778 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NfkbibQ60778 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.29■□□□□ 0.36
NfkbibQ60778 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.29■□□□□ 0.36
NfkbibQ60778 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NfkbibQ60778 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NfkbibQ60778 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms