Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.79□□□□□ -0.2
Nr1h4Q60641 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Gm13464-201ENSMUST00000119418 935 ntBASIC13.78□□□□□ -0.2
Nr1h4Q60641 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.78□□□□□ -0.2
Nr1h4Q60641 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nr1h4Q60641 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nr1h4Q60641 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nr1h4Q60641 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Nr1h4Q60641 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.77□□□□□ -0.2
Nr1h4Q60641 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nr1h4Q60641 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nr1h4Q60641 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Gm7230-201ENSMUST00000173026 815 ntBASIC13.77□□□□□ -0.21
Nr1h4Q60641 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.77□□□□□ -0.21
Nr1h4Q60641 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.77□□□□□ -0.21
Nr1h4Q60641 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.77□□□□□ -0.21
Nr1h4Q60641 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nr1h4Q60641 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.76□□□□□ -0.21
Nr1h4Q60641 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.76□□□□□ -0.21
Nr1h4Q60641 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Gm14042-201ENSMUST00000120139 833 ntBASIC13.76□□□□□ -0.21
Nr1h4Q60641 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Gm43347-201ENSMUST00000200226 580 ntBASIC13.76□□□□□ -0.21
Nr1h4Q60641 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nr1h4Q60641 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms