Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Gm12134-201ENSMUST00000122109 520 ntBASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Gm7730-201ENSMUST00000212486 454 ntBASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom1Q5SX79 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Gm8749-201ENSMUST00000117737 331 ntBASIC15.36■□□□□ 0.05
Shroom1Q5SX79 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Gm15487-201ENSMUST00000122373 465 ntBASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Gm2423-201ENSMUST00000074863 733 ntBASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom1Q5SX79 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Gm7488-201ENSMUST00000117148 684 ntBASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Gm15653-201ENSMUST00000119247 907 ntBASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Shroom1Q5SX79 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms