Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Mir1897-201ENSMUST00000122581 272 ntBASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Gm25144-201ENSMUST00000179561 110 ntBASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Gm25352-201ENSMUST00000179815 110 ntBASIC17.34■□□□□ 0.37
Vps54Q5SPW0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps54Q5SPW0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vps54Q5SPW0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vps54Q5SPW0 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Gm16476-201ENSMUST00000221544 139 ntBASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps54Q5SPW0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Gm13453-201ENSMUST00000118708 357 ntBASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Gm12151-201ENSMUST00000121374 290 ntBASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vps54Q5SPW0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.32■□□□□ 0.36
Vps54Q5SPW0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms