Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38aQ4FK66 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Gm23547-201ENSMUST00000158210 271 ntBASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Gm44855-201ENSMUST00000205725 362 ntBASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38aQ4FK66 Syt7-205ENSMUST00000224135 1557 ntBASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Gm7488-201ENSMUST00000117148 684 ntBASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Gm6916-202ENSMUST00000205523 195 ntBASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Prpf38aQ4FK66 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Gm12882-201ENSMUST00000121696 517 ntBASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38aQ4FK66 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf38aQ4FK66 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.83■□□□□ 0.29
Prpf38aQ4FK66 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf38aQ4FK66 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms