Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Gm37259-201ENSMUST00000193903 849 ntBASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shank3Q4ACU6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Gm26083-201ENSMUST00000157904 193 ntBASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Gm37466-201ENSMUST00000195692 652 ntBASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Gm18056-201ENSMUST00000207670 568 ntBASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Gm18061-201ENSMUST00000208350 562 ntBASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Gm18063-201ENSMUST00000208529 568 ntBASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Gm18052-201ENSMUST00000208750 559 ntBASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shank3Q4ACU6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.61■□□□□ 0.41
Shank3Q4ACU6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.61■□□□□ 0.41
Shank3Q4ACU6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Gm29741-201ENSMUST00000192667 421 ntBASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shank3Q4ACU6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shank3Q4ACU6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shank3Q4ACU6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms