Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Zfp560Q3URI6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Gm25287-201ENSMUST00000103846 110 ntBASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Gm22918-201ENSMUST00000103855 110 ntBASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.5□□□□□ -0.09
Zfp560Q3URI6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Zfp560Q3URI6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Zfp560Q3URI6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Gm14042-201ENSMUST00000120139 833 ntBASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Gm5867-201ENSMUST00000063197 592 ntBASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Zfp560Q3URI6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms