Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Gm15370-201ENSMUST00000117158 253 ntBASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Gm21769-201ENSMUST00000211922 111 ntBASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Spg11Q3UHA3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Gm4986-201ENSMUST00000119731 549 ntBASIC13.16□□□□□ -0.3
Spg11Q3UHA3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Gm8285-201ENSMUST00000208293 759 ntBASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Spg11Q3UHA3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm18584-201ENSMUST00000203098 964 ntBASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Gm14028-201ENSMUST00000117434 479 ntBASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Spg11Q3UHA3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms