Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Gm28911-201ENSMUST00000188837 117 ntBASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Gm37714-201ENSMUST00000194742 342 ntBASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Gm5035-201ENSMUST00000215581 927 ntBASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Gm4081-201ENSMUST00000195287 1838 ntBASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Puf60Q3UEB3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC19.73■□□□□ 0.75
Puf60Q3UEB3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Gm8131-201ENSMUST00000213783 1570 ntBASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Puf60Q3UEB3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Puf60Q3UEB3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Puf60Q3UEB3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Gm13829-201ENSMUST00000119600 138 ntBASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Gm17150-201ENSMUST00000165577 381 ntBASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Mir7085-201ENSMUST00000184353 66 ntBASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Puf60Q3UEB3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Puf60Q3UEB3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms