Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Gm5479-201ENSMUST00000160578 435 ntBASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Rpph1-201ENSMUST00000175096 319 ntBASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.62□□□□□ -0.23
Brf2Q3UAW9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Gm15483-201ENSMUST00000120338 456 ntBASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Gm44771-201ENSMUST00000206975 626 ntBASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf2Q3UAW9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Gm15467-201ENSMUST00000120582 445 ntBASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf2Q3UAW9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms