Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vars2Q3U2A8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Vars2Q3U2A8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vars2Q3U2A8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.72■□□□□ 0.43
Vars2Q3U2A8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vars2Q3U2A8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vars2Q3U2A8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vars2Q3U2A8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Gm43138-201ENSMUST00000199123 708 ntBASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Gm5363-201ENSMUST00000211927 938 ntBASIC17.71■□□□□ 0.43
Vars2Q3U2A8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vars2Q3U2A8 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.71■□□□□ 0.42
Vars2Q3U2A8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vars2Q3U2A8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vars2Q3U2A8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Vars2Q3U2A8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Gm24255-201ENSMUST00000104481 128 ntBASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vars2Q3U2A8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Gm10268-201ENSMUST00000085340 555 ntBASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Gm43289-201ENSMUST00000200537 1475 ntBASIC17.69■□□□□ 0.42
Vars2Q3U2A8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vars2Q3U2A8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vars2Q3U2A8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms