Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.34■□□□□ 0.05
Trim43aQ3TL54 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim43aQ3TL54 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trim43aQ3TL54 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43aQ3TL54 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43aQ3TL54 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43aQ3TL54 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43aQ3TL54 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43aQ3TL54 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Olfr286-202ENSMUST00000205305 969 ntBASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43aQ3TL54 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms